STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK53779.1TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_1267 RND efflux system, outer membrane lipoprotein, NodT. (512 aa)    
Predicted Functional Partners:
ACK53783.1
PFAM: secretion protein HlyD family protein; KEGG: dia:Dtpsy_1305 secretion protein HlyD family protein.
 
 
 0.952
ACK53782.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dia:Dtpsy_1304 ABC transporter related.
 
   
 0.879
ACK53780.1
PFAM: ABC-2 type transporter; KEGG: rme:Rmet_1268 ABC-type multidrug transport system permease component.
 
   
 0.868
ACK53781.1
PFAM: ABC-2 type transporter; KEGG: rme:Rmet_1269 ABC-type multidrug transport system permease component.
 
   
 0.861
ACK53278.1
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: tbd:Tbd_1418 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.791
ACK53279.1
TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: eba:ebA1972 acriflavine resistance protein B.
 
 0.791
ACK53784.1
KEGG: dia:Dtpsy_1306 hypothetical protein.
 
     0.757
macB
ABC transporter related; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.728
ACK53778.1
KEGG: dia:Dtpsy_1300 hypothetical protein.
       0.718
ACK53911.1
PFAM: secretion protein HlyD family protein; KEGG: eba:ebA6743 hypothetical protein.
 
 
 0.607
Your Current Organism:
Thauera sp. MZ1T
NCBI taxonomy Id: 85643
Other names: T. sp. MZ1T
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