STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACK54267.1phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (441 aa)    
Predicted Functional Partners:
ACK53537.1
PFAM: Aldehyde Dehydrogenase; KEGG: azo:azo2250 succinate semialdehyde dehydrogenase [NAD(P)+]; Belongs to the aldehyde dehydrogenase family.
  
 0.923
ACK54264.1
TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: dar:Daro_0377 phenylacetate-CoA oxygenase subunit PaaA.
 
 
 0.918
ACK54268.1
TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: dar:Daro_0373 phenylacetic acid degradation-related protein:phenylacetic acid degradation protein PaaD.
 
  
 0.910
ACK54261.1
TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: dar:Daro_0380 phenylacetate-CoA oxygenase, PaaJ subunit.
 
  
 0.907
ACK54262.1
TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: dar:Daro_0379 phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.905
ACK54263.1
TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: dar:Daro_0378 phenylacetate-CoA oxygenase subunit PaaB.
 
 
 0.904
ACK54260.1
PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dar:Daro_0381 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region.
 
 
 0.884
ACK54266.1
TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: dar:Daro_0375 thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.795
ACK54271.1
TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; KEGG: dar:Daro_0370 phenylacetic acid degradation protein paaN2.
 
 
 0.750
ACK54265.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dar:Daro_0383 enoyl-CoA hydratase.
     
 0.745
Your Current Organism:
Thauera sp. MZ1T
NCBI taxonomy Id: 85643
Other names: T. sp. MZ1T
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