STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaCpoly(R)-hydroxyalkanoic acid synthase, class I family protein. (616 aa)    
Predicted Functional Partners:
phaZ
Polyhydroxyalkanoate depolymerase, intracellular family protein.
 
  
 0.975
phbB
acetoacetyl-CoA reductase family protein.
  
 
 0.949
MICA_961
Alpha/beta hydrolase fold family protein.
  
  
 
0.929
phaR
Polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.808
MICA_1032
Diguanylate cyclase domain protein.
       0.559
MICA_2383
enoyl-CoA hydratase/isomerase family protein.
      
 0.510
MICA_467
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
      
 0.453
MICA_1034
Homoserine dehydrogenase family protein.
       0.413
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.