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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICA_136HAMP domain protein. (561 aa)    
Predicted Functional Partners:
MICA_137
Response regulator.
 0.993
MICA_2188
His Kinase A domain protein.
 
 
0.847
MICA_1695
Sensory box protein.
 
 
 0.791
MICA_1069
Sensory box protein.
 
 0.790
MICA_1929
His Kinase A domain protein.
 
 
0.771
MICA_944
Response regulator.
 
 0.755
MICA_1956
Response regulator.
 
 
 
 0.751
MICA_712
Response regulator.
 
 
 0.742
MICA_900
Sensory box protein.
 
 
0.730
MICA_1972
His Kinase A domain protein.
 
 
0.715
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.