Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MICA_1978Transglycosylase SLT domain protein. (776 aa)    
Predicted Functional Partners:
MICA_1202
Hypothetical protein.
  
     0.731
dinG
ATP-dependent DNA helicase.
  
     0.685
MICA_2090
Putative uncharacterized protein.
  
     0.637
MICA_1979
uracil-DNA glycosylase, 4 family protein.
   
   0.607
MICA_754
Hypothetical protein.
  
   
 0.576
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
       0.537
MICA_1433
Putative uncharacterized protein.
  
   
 0.523
MICA_41
Putative uncharacterized protein.
  
     0.511
MICA_1980
Electron transfer flavo-ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
       0.499
mrdA
Penicillin-binding protein 2.
 
  
 0.492
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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