Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MICA_2011Pyridoxal-dependent decarboxylase, C-terminal sheet domain protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (408 aa)    
Predicted Functional Partners:
MICA_494
Arginase family protein; Belongs to the arginase family.
  
 
 0.922
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.663
apt
Adenine phosphoribosyltransferase.
  
  
 0.530
MICA_2013
CHAP domain protein.
 
     0.484
MICA_39
Putative uncharacterized protein.
  
     0.425
pheT
phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
  
 0.410
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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