STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICA_2016Hypothetical protein. (248 aa)    
Predicted Functional Partners:
MICA_2015
Hypothetical protein.
       0.701
MICA_2014
Hypothetical protein.
       0.696
MICA_718
dnaJ domain protein.
  
     0.658
MICA_785
Bacterial regulatory s, tetR family protein.
  
     0.484
MICA_2017
Conserved hypothetical protein.
       0.456
MICA_629
Putative uncharacterized protein.
  
     0.432
MICA_1957
Conserved hypothetical protein.
  
     0.421
MICA_2018
Transporter, solute:sodium symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.419
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.