STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICA_2020Putative hemagglutinin. (2332 aa)    
Predicted Functional Partners:
MICA_2021
Surface antigen family protein.
 
   
 0.838
MICA_1539
ABC transporter family protein.
  
 
 0.798
MICA_2019
Pyridine nucleotide-disulfide oxidoreductase family protein.
       0.539
cobS
Cobaltochelatase, CobS subunit.
   
    0.520
MICA_1311
MBOAT family protein; Belongs to the membrane-bound acyltransferase family.
 
  
 0.484
MICA_493
Nucleotidyl transferase family protein.
 
  
 0.465
MICA_771
Flagellar FlaF family protein.
  
     0.428
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.