STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICA_2194Zinc-binding dehydrogenase. (353 aa)    
Predicted Functional Partners:
MICA_1476
Aldehyde dehydrogenase domain protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.917
MICA_1669
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.917
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.915
MICA_817
maeB.
  
  
 0.789
ygiW
Conserved protein.
  
    0.693
MICA_2193
Methyladenine glycosylase family protein.
       0.630
MICA_2383
enoyl-CoA hydratase/isomerase family protein.
  
  
 0.555
MICA_2192
Conserved hypothetical protein.
       0.496
MICA_2196
Putative uncharacterized protein.
       0.471
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.425
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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