Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
MICA_221Cytochrome b561 family protein; Belongs to the UPF0312 family. (362 aa)    
Predicted Functional Partners:
MICA_220
yceI-like domain protein; Belongs to the UPF0312 family.
 
  
 0.949
MICA_1980
Electron transfer flavo-ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.577
azoR
Flavodoxin-like fold family protein; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
     
 0.567
MICA_1929
His Kinase A domain protein.
     
 0.522
MICA_1550
Pirin family protein; Belongs to the pirin family.
     
 0.429
MICA_296
Pirin C-terminal cupin domain protein; Belongs to the pirin family.
     
 0.429
MICA_307
Pirin C-terminal cupin domain protein; Belongs to the pirin family.
     
 0.429
sodB
Superoxide dismutase (Mn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.423
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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