STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICA_233Putative membrane protein. (716 aa)    
Predicted Functional Partners:
MICA_232
ahpC/TSA family protein.
 
   
 0.936
MICA_1442
ahpC/TSA family protein.
  
 
 0.869
MICA_1815
Periplasmic thiol:disulfide oxidoreductase, DsbE family protein.
  
 
 0.869
MICA_846
NHL repeat family protein.
  
 
 0.869
msrB
methionine-R-sulfoxide reductase.
   
 
 0.844
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.819
MICA_2267
DSBA-like thioredoxin domain protein.
 
 
 0.813
MICA_1200
Putative uncharacterized protein.
  
 
 0.788
MICA_2268
DSBA-like thioredoxin domain protein.
  
 
 0.788
MICA_2444
Hypothetical protein.
  
 
 0.788
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.