Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MICA_237Putative uncharacterized protein. (175 aa)    
Predicted Functional Partners:
MICA_236
spoU rRNA Methylase family protein.
 
     0.738
MICA_765
Hypothetical protein.
  
     0.698
MICA_48
Hypothetical protein.
  
     0.661
MICA_713
Putative uncharacterized protein.
  
     0.656
MICA_632
Sporulation related domain protein.
  
     0.643
MICA_1306
Septum formation initiator family protein.
  
     0.623
MICA_1470
dnaJ domain protein.
  
     0.619
MICA_1185
Periplasmic protein TonB.
  
     0.612
MICA_439
hemY family protein.
  
     0.581
MICA_965
asmA family protein.
  
     0.564
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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