Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hppD4-hydroxyphenylpyruvate dioxygenase. (355 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
 
 0.996
phhA
Phenylalanine-4-hydroxylase.
 
  
 0.955
maiA
Maleylacetoacetate isomerase.
 
  
 0.937
MICA_269
Fumarylacetoacetate (FAA) hydrolase family protein.
 
  
 0.926
MICA_1604
Aminotransferase class I and II family protein.
   
 
 0.912
MICA_235
Beta-eliminating lyase family protein.
   
 
 0.912
MICA_1280
Aminotransferase class IV family protein.
   
 
  0.900
MICA_792
Pterin 4 alpha carbinolamine dehydratase family protein.
  
  
 0.791
MICA_885
Carboxyl transferase domain protein.
  
  
 0.773
MICA_2383
enoyl-CoA hydratase/isomerase family protein.
  
  
 0.706
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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