Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MICA_269Fumarylacetoacetate (FAA) hydrolase family protein. (326 aa)    
Predicted Functional Partners:
maiA
Maleylacetoacetate isomerase.
 
 0.997
hppD
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.926
hmgA
Homogentisate 1,2-dioxygenase.
  
  
 0.856
sdhA
Succinate dehydrogenase, flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
  0.834
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
  0.828
MICA_1919
Succinate dehydrogenase and fumarate reductase iron-sulfur family protein.
  
 
  0.819
phhA
Phenylalanine-4-hydroxylase.
 
  
 0.818
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein.
   
 
  0.807
sdhC
Succinate dehydrogenase, cytochrome b556 subunit.
   
 
  0.806
MICA_2383
enoyl-CoA hydratase/isomerase family protein.
  
  
 0.628
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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