Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MICA_412Putative uncharacterized protein. (172 aa)    
Predicted Functional Partners:
MICA_424
Putative uncharacterized protein 10.
  
   
 0.781
MICA_573
Putative uncharacterized protein 10.
  
   
 0.781
MICA_413
Platelet-activating factor acetylhydrolase plasma/intracellular isoform II domain protein.
       0.752
MICA_1666
Conserved hypothetical protein.
  
   
 0.745
addB
Double-strand break repair protein AddB.
  
     0.732
MICA_994
smpA / OmlA family protein.
  
     0.665
MICA_177
Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
  
     0.643
addA
Double-strand break repair helicase AddA; Belongs to the helicase family. UvrD subfamily.
  
     0.639
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.638
MICA_1093
Bacterial SH3 domain protein.
  
     0.636
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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