Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
MICA_424Putative uncharacterized protein 10. (95 aa)    
Predicted Functional Partners:
MICA_412
Putative uncharacterized protein.
  
   
 0.781
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.717
addB
Double-strand break repair protein AddB.
  
     0.716
MICA_1093
Bacterial SH3 domain protein.
  
     0.691
ftsQ
Cell division FtsQ family protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
     0.664
MICA_227
Glutathione S-transferase, N-terminal domain protein.
  
     0.661
MICA_994
smpA / OmlA family protein.
  
     0.657
MICA_1666
Conserved hypothetical protein.
  
   
 0.649
MICA_1450
Conserved hypothetical protein.
  
     0.598
MICA_423
N-formylglutamate amidohydrolase family protein.
       0.580
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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