Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MICA_488Fatty acid hydroxylase superfamily protein. (309 aa)    
Predicted Functional Partners:
MICA_841
Putative uncharacterized protein.
  
 
 0.734
MICA_1684
N-terminal double-transmembrane domain protein.
   
 
 0.715
MICA_487
Putative membrane protein.
       0.556
MICA_959
Diguanylate cyclase domain protein.
   
    0.550
MICA_1991
Hypothetical protein.
   
    0.536
MICA_489
Hypothetical protein.
       0.497
MICA_490
Hypothetical protein.
       0.497
MICA_529
Hypothetical protein.
  
    0.483
MICA_1657
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein.
   
 
 0.480
MICA_2417
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein.
   
 
 0.480
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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