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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICA_488Fatty acid hydroxylase superfamily protein. (309 aa)    
Predicted Functional Partners:
MICA_841
Putative uncharacterized protein.
  
 
 0.838
MICA_1684
N-terminal double-transmembrane domain protein.
   
 
 0.811
MICA_1657
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein.
   
 
 0.597
MICA_2417
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein.
   
 
 0.597
MICA_487
Putative membrane protein.
       0.556
ger1
GDP-L-fucose synthase 1; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
 0.536
MICA_2378
2OG-Fe(II) oxygenase superfamily protein.
   
  
 0.516
MICA_1991
Hypothetical protein.
   
    0.499
MICA_489
Hypothetical protein.
       0.497
MICA_490
Hypothetical protein.
       0.497
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.