Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
MICA_504Sodium:dicarboxylate symporter family protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (442 aa)    
Predicted Functional Partners:
MICA_817
maeB.
  
  
 0.743
sdhD
Succinate dehydrogenase, hydrophobic membrane anchor protein.
   
    0.731
MICA_506
Bacterial regulatory helix-turn-helix, lysR family protein; Belongs to the LysR transcriptional regulatory family.
  
  
 0.643
MICA_505
Rhodanese-like domain protein; Belongs to the UPF0176 family.
       0.624
MICA_503
Putative membrane protein.
       0.520
MICA_2393
Ankyrin repeat family protein.
   
 0.488
mgtE
Magnesium transporter; Acts as a magnesium transporter.
 
   
 0.433
MICA_1695
Sensory box protein.
     
 0.432
ahpC
Alkyl hydroperoxide reductase subunit C.
       0.431
MICA_1304
Transketolase, C-terminal domain protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.418
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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