Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MICA_516Putative uncharacterized protein. (292 aa)    
Predicted Functional Partners:
MICA_515
Putative phospholipid-binding domain protein.
 
     0.817
rsmI
Tetrapyrrole methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.712
MICA_514
Conserved hypothetical protein; Belongs to the UPF0102 family.
       0.712
MICA_665
Conserved hypothetical protein.
  
     0.556
MICA_846
NHL repeat family protein.
  
     0.507
MICA_512
Extracellular ligand-binding receptor.
       0.456
MICA_1453
Chorismate mutase type II family protein.
  
     0.453
pal
Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
       0.437
mreD
Rod shape-determining protein MreD.
  
     0.433
MICA_1202
Hypothetical protein.
  
     0.430
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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