Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MICA_602Response regulator. (118 aa)    
Predicted Functional Partners:
MICA_713
Putative uncharacterized protein.
   
 0.929
MICA_900
Sensory box protein.
 
 
 0.788
MICA_1929
His Kinase A domain protein.
 
 
 0.699
MICA_230
Sensory box protein.
 
 
 0.685
MICA_467
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
 
 0.671
MICA_1956
Response regulator.
  
 
 0.642
MICA_1972
His Kinase A domain protein.
 
 
 0.639
MICA_1069
Sensory box protein.
 
 
 
 0.617
fliM
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
  
 0.601
MICA_2188
His Kinase A domain protein.
 
 
 0.582
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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