Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MICA_69Diguanylate cyclase domain protein. (351 aa)    
Predicted Functional Partners:
MICA_1870
Cyclic nucleotide-binding domain protein.
 
 0.986
MICA_210
Cyclic nucleotide-binding domain protein.
 
 0.986
MICA_977
EAL domain protein.
  
 0.975
MICA_900
Sensory box protein.
 
 0.854
MICA_959
Diguanylate cyclase domain protein.
   0.854
MICA_740
EAL domain protein.
 
  
 0.830
MICA_1929
His Kinase A domain protein.
 
 0.796
MICA_1527
HD domain protein.
 
 
 0.773
MICA_2186
Response regulator.
 
  
 0.694
MICA_467
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.
  
  
 0.668
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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