Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MICA_690Nitroreductase family protein. (203 aa)    
Predicted Functional Partners:
MICA_1546
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
  
  
 0.560
MICA_623
glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein.
  
  
 0.560
MICA_691
Hypothetical protein.
       0.552
MICA_692
Hypothetical protein.
       0.552
MICA_856
AMP-binding enzyme family protein.
 
 
   0.479
MICA_2335
Response regulator.
  
  
 0.478
MICA_876
CAAX amino terminal protease family protein.
  
    0.471
MICA_2247
AMP-binding enzyme family protein.
 
 
   0.463
codA
Cytidine and deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.437
MICA_1980
Electron transfer flavo-ubiquinone oxidoreductase family protein; Accepts electrons from ETF and reduces ubiquinone.
      
 0.418
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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