Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
MICA_744Prepilin-type N-terminal cleavage/methylation domain protein; Overlaps another CDS with the same product name. (377 aa)    
Predicted Functional Partners:
MICA_743
Prepilin-type N-terminal cleavage/methylation domain protein; Overlaps another CDS with the same product name.
      
0.773
MICA_742
Prepilin-type N-terminal cleavage/methylation domain protein.
      
0.664
MICA_1544
Type II/IV secretion system family protein.
  
 
 0.615
MICA_1935
Type II/IV secretion system family protein.
  
 
 0.615
MICA_1543
Bacterial type II secretion system F domain protein.
  
  
 0.591
MICA_1934
Hypothetical protein.
  
  
 0.591
pyrD
Dihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
    0.464
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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