Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
MICA_779Glycine cleavage T-C-terminal barrel domain protein; Belongs to the GcvT family. (258 aa)    
Predicted Functional Partners:
MICA_630
Iron-sulfur cluster assembly accessory family protein; Belongs to the HesB/IscA family.
 
 
 0.738
MICA_1088
Iron-sulfur cluster assembly accessory family protein; Belongs to the HesB/IscA family.
 
 
 0.726
MICA_780
Glycosyltransferase 9 family protein.
       0.607
MICA_2299
Conserved hypothetical protein.
 
 
    0.572
MICA_1661
Putative methyltransferase.
  
     0.491
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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