STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICA_821N-formylglutamate amidohydrolase family protein. (328 aa)    
Predicted Functional Partners:
MICA_822
N-formylglutamate amidohydrolase.
 
  
 
0.974
MICA_1608
glutamate/Leucine/Phenylalanine/Valine dehydrogenase family protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
  0.825
MICA_1008
Asparagine synthase.
     
  0.800
MICA_1023
Asparagine synthase.
     
  0.800
MICA_1242
Hypothetical protein; Belongs to the PEPCase type 1 family.
     
  0.800
glnA
Glutamine synthetase, type I.
     
  0.800
MICA_1604
Aminotransferase class I and II family protein.
     
  0.800
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
  0.800
putA
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
  0.800
MICA_235
Beta-eliminating lyase family protein.
     
  0.800
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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