STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICA_885Carboxyl transferase domain protein. (535 aa)    
Predicted Functional Partners:
MICA_888
Biotin-requiring enzyme family protein.
 0.999
MICA_886
enoyl-CoA hydratase/isomerase family protein.
 0.989
MICA_890
acyl-CoA dehydrogenase, N-terminal domain protein.
 
 0.989
accC
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.946
MICA_978
enoyl-CoA hydratase/isomerase family protein.
  
 0.937
MICA_1106
acyl-CoA dehydrogenase, middle domain protein.
  
 
 0.930
MICA_2383
enoyl-CoA hydratase/isomerase family protein.
  
 
 0.887
MICA_1350
biotin-[acetyl-CoA-carboxylase] ligase.
 
 
 0.884
hppD
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.814
hmgCL
hydroxymethylglutaryl-CoA lyase.
 
 0.792
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.