STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaRPolyhydroxyalkanoate synthesis repressor PhaR. (184 aa)    
Predicted Functional Partners:
MICA_961
Alpha/beta hydrolase fold family protein.
 
   
 0.906
phaC
poly(R)-hydroxyalkanoic acid synthase, class I family protein.
 
   
 0.808
phaZ
Polyhydroxyalkanoate depolymerase, intracellular family protein.
 
   
 0.755
phbB
acetoacetyl-CoA reductase family protein.
 
   
 0.625
phbA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.520
MICA_616
Conserved hypothetical protein.
  
     0.486
MICA_1606
Phosphotransferase enzyme family protein.
  
     0.419
Your Current Organism:
Micavibrio aeruginosavorus ARL13
NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.