MICA_994 protein (Micavibrio aeruginosavorus ARL13)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MICA_994

smpA / OmlA family protein. (157 aa)

Predicted Functional Partners:

yfiO

0.918

yaeT

0.913

MICA_348

0.856

MICA_41

0.774

MICA_2090

0.743

lptD

0.735

MICA_177

0.726

MICA_996

0.684

addB

0.673

MICA_573

0.668

Your Current Organism:

Micavibrio aeruginosavorus ARL13

NCBI taxonomy Id: 856793
Other names: M. aeruginosavorus ARL-13, Micavibrio aeruginosavorus ARL-13, Micavibrio aeruginosavorus str. ARL-13, Micavibrio aeruginosavorus strain ARL-13

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MICA_177	MICA_2090	MICA_177	MICA_2090	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Putative uncharacterized protein.	0.501
MICA_177	MICA_348	MICA_177	MICA_348	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	PQQ enzyme repeat family protein.	0.442
MICA_177	MICA_41	MICA_177	MICA_41	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Putative uncharacterized protein.	0.484
MICA_177	MICA_573	MICA_177	MICA_573	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Putative uncharacterized protein 10.	0.460
MICA_177	MICA_994	MICA_177	MICA_994	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	smpA / OmlA family protein.	0.726
MICA_177	addB	MICA_177	MICA_122	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Double-strand break repair protein AddB.	0.769
MICA_177	lptD	MICA_177	MICA_1396	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Organic solvent tolerance family protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	0.525
MICA_177	yaeT	MICA_177	MICA_1331	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	Outer membrane assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.	0.497
MICA_2090	MICA_177	MICA_2090	MICA_177	Putative uncharacterized protein.	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.501
MICA_2090	MICA_348	MICA_2090	MICA_348	Putative uncharacterized protein.	PQQ enzyme repeat family protein.	0.737
MICA_2090	MICA_41	MICA_2090	MICA_41	Putative uncharacterized protein.	Putative uncharacterized protein.	0.775
MICA_2090	MICA_994	MICA_2090	MICA_994	Putative uncharacterized protein.	smpA / OmlA family protein.	0.743
MICA_2090	addB	MICA_2090	MICA_122	Putative uncharacterized protein.	Double-strand break repair protein AddB.	0.507
MICA_2090	lptD	MICA_2090	MICA_1396	Putative uncharacterized protein.	Organic solvent tolerance family protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	0.416
MICA_348	MICA_177	MICA_348	MICA_177	PQQ enzyme repeat family protein.	Outer membrane lipocarrier LolA family protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).	0.442
MICA_348	MICA_2090	MICA_348	MICA_2090	PQQ enzyme repeat family protein.	Putative uncharacterized protein.	0.737
MICA_348	MICA_41	MICA_348	MICA_41	PQQ enzyme repeat family protein.	Putative uncharacterized protein.	0.761
MICA_348	MICA_994	MICA_348	MICA_994	PQQ enzyme repeat family protein.	smpA / OmlA family protein.	0.856
MICA_348	addB	MICA_348	MICA_122	PQQ enzyme repeat family protein.	Double-strand break repair protein AddB.	0.400
MICA_348	lptD	MICA_348	MICA_1396	PQQ enzyme repeat family protein.	Organic solvent tolerance family protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.	0.526

page 1 of 4

Server load: low (8%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About