STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4RQY4_9ROSISWIM-type domain-containing protein. (351 aa)    
Predicted Functional Partners:
V4SF39_9ROSI
Uncharacterized protein.
  
 
   0.517
V4V0G2_9ROSI
SWIM-type domain-containing protein.
  
 
   0.498
V4SIE8_9ROSI
SWIM-type domain-containing protein.
  
     0.488
V4SPH6_9ROSI
MULE domain-containing protein.
  
 
   0.487
V4RFQ0_9ROSI
SWIM-type domain-containing protein.
  
 
   0.479
V4UEN1_9ROSI
SWIM-type domain-containing protein.
  
 
   0.474
V4U9P8_9ROSI
FAR1 domain-containing protein.
  
     0.431
V4TZE7_9ROSI
FAR1 domain-containing protein.
  
     0.422
V4U1D1_9ROSI
SWIM-type domain-containing protein.
  
     0.419
V4WI03_9ROSI
SWIM-type domain-containing protein.
  
 
   0.419
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.