STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4RRR9_9ROSIUncharacterized protein. (521 aa)    
Predicted Functional Partners:
V4TJ42_9ROSI
Nuclear cap-binding protein subunit 2.
    
 0.559
V4T7I5_9ROSI
Uncharacterized protein.
    
 0.537
V4U5T8_9ROSI
Uncharacterized protein.
    
 0.489
V4W0T3_9ROSI
MIF4G domain-containing protein.
    
 0.489
V4T8K1_9ROSI
RRM domain-containing protein.
    
 0.481
V4RZM0_9ROSI
MPN domain-containing protein.
   
   0.469
V4SUL9_9ROSI
Uncharacterized protein.
   
  0.469
V4U1W1_9ROSI
Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.462
V4RY23_9ROSI
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.452
V4SJB9_9ROSI
Uncharacterized protein.
    
   0.449
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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