STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4RUN4_9ROSIPX domain-containing protein. (566 aa)    
Predicted Functional Partners:
V4TWX8_9ROSI
Uncharacterized protein.
    
 
 0.731
V4THN1_9ROSI
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.683
V4TPV5_9ROSI
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.683
V4RV84_9ROSI
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.559
V4V8H5_9ROSI
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.559
V4V9V7_9ROSI
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.542
V4SDN8_9ROSI
Uncharacterized protein.
   
 
 0.539
V4TGT7_9ROSI
PSII_BNR domain-containing protein.
    
 0.525
V4S335_9ROSI
Uncharacterized protein.
  
    0.512
V4WCW6_9ROSI
J domain-containing protein.
  
 
 
 0.509
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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