Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4RXM8_9ROSI | V4SDF2_9ROSI | V4RXM8 | V4SDF2 | TPT domain-containing protein. | Na_H_Exchanger domain-containing protein. | 0.461 |
V4RXM8_9ROSI | V4TV89_9ROSI | V4RXM8 | V4TV89 | TPT domain-containing protein. | Bin3-type SAM domain-containing protein. | 0.452 |
V4RXM8_9ROSI | V4UEI2_9ROSI | V4RXM8 | V4UEI2 | TPT domain-containing protein. | Bin3-type SAM domain-containing protein. | 0.452 |
V4RXM8_9ROSI | V4UIL6_9ROSI | V4RXM8 | V4UIL6 | TPT domain-containing protein. | KH domain-containing protein. | 0.487 |
V4RXM8_9ROSI | V4UT45_9ROSI | V4RXM8 | V4UT45 | TPT domain-containing protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | 0.442 |
V4RXM8_9ROSI | V4V2M8_9ROSI | V4RXM8 | V4V2M8 | TPT domain-containing protein. | Uncharacterized protein. | 0.561 |
V4SDF2_9ROSI | V4RXM8_9ROSI | V4SDF2 | V4RXM8 | Na_H_Exchanger domain-containing protein. | TPT domain-containing protein. | 0.461 |
V4TV89_9ROSI | V4RXM8_9ROSI | V4TV89 | V4RXM8 | Bin3-type SAM domain-containing protein. | TPT domain-containing protein. | 0.452 |
V4TV89_9ROSI | V4UEI2_9ROSI | V4TV89 | V4UEI2 | Bin3-type SAM domain-containing protein. | Bin3-type SAM domain-containing protein. | 0.449 |
V4TV89_9ROSI | V4V2M8_9ROSI | V4TV89 | V4V2M8 | Bin3-type SAM domain-containing protein. | Uncharacterized protein. | 0.474 |
V4UEI2_9ROSI | V4RXM8_9ROSI | V4UEI2 | V4RXM8 | Bin3-type SAM domain-containing protein. | TPT domain-containing protein. | 0.452 |
V4UEI2_9ROSI | V4TV89_9ROSI | V4UEI2 | V4TV89 | Bin3-type SAM domain-containing protein. | Bin3-type SAM domain-containing protein. | 0.449 |
V4UEI2_9ROSI | V4V2M8_9ROSI | V4UEI2 | V4V2M8 | Bin3-type SAM domain-containing protein. | Uncharacterized protein. | 0.474 |
V4UIL6_9ROSI | V4RXM8_9ROSI | V4UIL6 | V4RXM8 | KH domain-containing protein. | TPT domain-containing protein. | 0.487 |
V4UIL6_9ROSI | V4V2M8_9ROSI | V4UIL6 | V4V2M8 | KH domain-containing protein. | Uncharacterized protein. | 0.491 |
V4UT45_9ROSI | V4RXM8_9ROSI | V4UT45 | V4RXM8 | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at the specific target site 5'-[CT]CCTTp site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(3'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 5'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand thus r [...] | TPT domain-containing protein. | 0.442 |
V4V2M8_9ROSI | V4RXM8_9ROSI | V4V2M8 | V4RXM8 | Uncharacterized protein. | TPT domain-containing protein. | 0.561 |
V4V2M8_9ROSI | V4TV89_9ROSI | V4V2M8 | V4TV89 | Uncharacterized protein. | Bin3-type SAM domain-containing protein. | 0.474 |
V4V2M8_9ROSI | V4UEI2_9ROSI | V4V2M8 | V4UEI2 | Uncharacterized protein. | Bin3-type SAM domain-containing protein. | 0.474 |
V4V2M8_9ROSI | V4UIL6_9ROSI | V4V2M8 | V4UIL6 | Uncharacterized protein. | KH domain-containing protein. | 0.491 |