STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4S405_9ROSIUncharacterized protein. (967 aa)    
Predicted Functional Partners:
V4SFG6_9ROSI
Uncharacterized protein.
   
 0.959
V4SS46_9ROSI
Uncharacterized protein.
   
 0.959
V4V979_9ROSI
Uncharacterized protein.
   
 0.959
V4UHX9_9ROSI
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
  
  
0.939
V4UED2_9ROSI
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
     
0.926
V4VS66_9ROSI
Uncharacterized protein.
   
 0.839
V4U6I4_9ROSI
Uncharacterized protein.
   
 
 0.815
V4UCX6_9ROSI
TOG domain-containing protein.
   
 
 0.810
V4UVB1_9ROSI
Sm domain-containing protein.
   
 
 0.803
V4RUG8_9ROSI
Uncharacterized protein.
   
 
 0.791
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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