STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4S692_9ROSIUncharacterized protein. (1407 aa)    
Predicted Functional Partners:
V4S7A8_9ROSI
Uncharacterized protein.
  
 0.992
V4SQL0_9ROSI
Uncharacterized protein.
  
 
 0.982
V4SB57_9ROSI
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.867
V4SR78_9ROSI
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.828
V4S5L3_9ROSI
Tower domain-containing protein.
   
 
 0.827
V4S3Y2_9ROSI
Uncharacterized protein.
    
 0.825
V4UUQ0_9ROSI
Ubiquitin-like domain-containing protein.
    
  0.821
V4S7I3_9ROSI
Uncharacterized protein.
    
 0.818
V4SAJ5_9ROSI
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
 0.818
V4SFJ1_9ROSI
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.773
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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