STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SAE9_9ROSISister chromatid cohesion protein. (1822 aa)    
Predicted Functional Partners:
V4SEN3_9ROSI
Structural maintenance of chromosomes protein.
   
 0.995
V4SCJ3_9ROSI
DUF641 domain-containing protein.
   
 0.984
V4TZ79_9ROSI
Structural maintenance of chromosomes protein.
   
 0.984
V4TFV4_9ROSI
SMC_N domain-containing protein.
   
 0.962
V4SCH0_9ROSI
Uncharacterized protein.
  
 
 0.959
V4V9Y1_9ROSI
Uncharacterized protein.
  
 0.958
V4UHJ8_9ROSI
Uncharacterized protein.
   
 0.957
V4V0L3_9ROSI
Uncharacterized protein.
    
 0.950
V4SWM2_9ROSI
Rad21_Rec8 domain-containing protein.
   
 0.949
V4U387_9ROSI
Uncharacterized protein.
   
 0.949
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.