STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SAY1_9ROSITudor domain-containing protein. (295 aa)    
Predicted Functional Partners:
V4UCU5_9ROSI
LRRcap domain-containing protein.
     
 0.909
V4S2X8_9ROSI
Matrin-type domain-containing protein.
    
  0.908
V4RUG8_9ROSI
Uncharacterized protein.
     
 0.878
V4UCX6_9ROSI
TOG domain-containing protein.
   
 0.858
V4TJG4_9ROSI
TPR_REGION domain-containing protein.
    
 
 0.845
V4TPV6_9ROSI
Uncharacterized protein.
    
 
 0.845
V4UNY2_9ROSI
Uncharacterized protein.
    
 
 0.845
V4V3N8_9ROSI
Uncharacterized protein.
    
 
 0.845
V4U6J7_9ROSI
Uncharacterized protein.
   
 
  0.817
V4TNG4_9ROSI
Sm domain-containing protein.
   
 0.806
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.