STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SB37_9ROSIUncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family. (721 aa)    
Predicted Functional Partners:
V4T959_9ROSI
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.997
V4U4S9_9ROSI
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.997
V4SVG7_9ROSI
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.985
V4U2F7_9ROSI
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.985
V4U6Q8_9ROSI
AA_TRNA_LIGASE_II domain-containing protein.
 
 0.982
V4VAS8_9ROSI
AA_TRNA_LIGASE_II domain-containing protein.
 
 0.982
V4U7L4_9ROSI
AA_TRNA_LIGASE_II domain-containing protein.
 
 0.981
V4TS11_9ROSI
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.978
V4TBH4_9ROSI
Glutamyl-tRNA reductase; Belongs to the glutamyl-tRNA reductase family.
     
 0.975
V4VSP8_9ROSI
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.975
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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