STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SCI2_9ROSIUncharacterized protein; Belongs to the peptidase M16 family. (1001 aa)    
Predicted Functional Partners:
V4UUQ0_9ROSI
Ubiquitin-like domain-containing protein.
    
  0.795
V4RT13_9ROSI
Ubiquitin-like domain-containing protein.
    
  0.612
V4SDL5_9ROSI
Ribosomal_S27 domain-containing protein.
    
  0.612
V4TBY1_9ROSI
Ubiquitin-like domain-containing protein.
    
  0.612
V4VGA7_9ROSI
Ubiquitin-like domain-containing protein.
    
  0.612
V4TFW0_9ROSI
Uncharacterized protein.
      
 0.438
V4SFW4_9ROSI
Mitochondrial Rho GTPase.
   
 
  0.436
V4U580_9ROSI
Mitochondrial Rho GTPase.
   
 
  0.436
V4SWG2_9ROSI
TPR_REGION domain-containing protein.
   
    0.435
V4W739_9ROSI
Uncharacterized protein.
   
    0.435
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.