STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SG28_9ROSIUncharacterized protein. (256 aa)    
Predicted Functional Partners:
V4U241_9ROSI
ULP_PROTEASE domain-containing protein.
    
 0.605
V4UNK8_9ROSI
PGG domain-containing protein.
  
 
  0.554
V4SYN9_9ROSI
Hydrophob_seed domain-containing protein.
  
 
  0.535
V4THQ4_9ROSI
Uncharacterized protein.
  
 
  0.534
V4T3G1_9ROSI
Hydrophob_seed domain-containing protein.
  
 
  0.533
V4S0Q7_9ROSI
Uncharacterized protein.
  
     0.530
V4UU35_9ROSI
Hydrophob_seed domain-containing protein.
  
 
  0.530
V4S0E5_9ROSI
GST N-terminal domain-containing protein.
  
 
   0.527
V4UTR7_9ROSI
Hydrophob_seed domain-containing protein.
  
 
  0.527
V4S0Q4_9ROSI
Uncharacterized protein.
  
     0.524
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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