STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SJD0_9ROSIUncharacterized protein. (90 aa)    
Predicted Functional Partners:
V4U8E5_9ROSI
Uncharacterized protein.
   
 
 0.979
V4SZ67_9ROSI
Uncharacterized protein.
   
 
 0.973
V4SYJ2_9ROSI
Uncharacterized protein.
   
 
 0.968
V4UTM1_9ROSI
Uncharacterized protein.
   
 
 0.966
V4TD07_9ROSI
Uncharacterized protein.
   
 
 0.956
V4RUQ3_9ROSI
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 
 0.953
V4U8B9_9ROSI
Uncharacterized protein.
   
 
 0.952
V4TNF2_9ROSI
Uncharacterized protein.
   
 
 0.946
V4UM17_9ROSI
Uncharacterized protein.
   
 
 0.945
V4TMT5_9ROSI
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.943
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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