STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SJF2_9ROSIUncharacterized protein. (567 aa)    
Predicted Functional Partners:
V4U241_9ROSI
ULP_PROTEASE domain-containing protein.
    
 0.605
V4TKW6_9ROSI
Uncharacterized protein.
  
     0.537
V4SR93_9ROSI
NPR1_like_C domain-containing protein.
  
 
  0.535
V4UFN5_9ROSI
Uncharacterized protein.
  
     0.531
V4SDE6_9ROSI
Uncharacterized protein.
  
 
  0.530
V4SKG2_9ROSI
Uncharacterized protein.
  
     0.530
V4U3Q6_9ROSI
SAND domain-containing protein.
  
     0.528
V4UI48_9ROSI
HMA domain-containing protein.
  
     0.526
V4WGY8_9ROSI
Uncharacterized protein.
  
     0.522
V4URV1_9ROSI
Uncharacterized protein.
  
     0.518
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.