STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SLX3_9ROSIUncharacterized protein. (543 aa)    
Predicted Functional Partners:
V4TGQ1_9ROSI
Amidohydro-rel domain-containing protein.
 
  
 0.753
V4TF52_9ROSI
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
  
  
 0.677
V4U993_9ROSI
Amidohydro-rel domain-containing protein.
  
  
 0.674
V4VZ35_9ROSI
Uncharacterized protein.
 
   
 0.673
V4SK36_9ROSI
Uncharacterized protein.
  
  
 0.607
V4RKJ0_9ROSI
Cytoplasmic tRNA 2-thiolation protein 2; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6/CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
      
 0.543
V4RIC4_9ROSI
Uncharacterized protein.
      
 0.541
V4RSJ6_9ROSI
Uncharacterized protein.
  
  
 0.539
V4SKG7_9ROSI
Uncharacterized protein.
  
  
 0.539
V4W4E0_9ROSI
Uncharacterized protein.
  
  
 0.539
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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