STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4SYI3_9ROSICobW C-terminal domain-containing protein. (350 aa)    
Predicted Functional Partners:
V4TBM3_9ROSI
Uncharacterized protein.
  
 
 0.702
V4U2R6_9ROSI
Uncharacterized protein.
  
  
 0.585
V4UM17_9ROSI
Uncharacterized protein.
  
  
 0.585
V4SCG9_9ROSI
DUF3479 domain-containing protein.
  
  
 0.568
V4TF33_9ROSI
Uncharacterized protein.
  
  
 0.556
V4RW87_9ROSI
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.461
V4ST04_9ROSI
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.461
V4VYJ5_9ROSI
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 
 0.461
V4U3Z7_9ROSI
PRA-CH domain-containing protein.
     
 0.406
V4U1P5_9ROSI
CbiX domain-containing protein.
     
 0.402
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
Server load: low (22%) [HD]