STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4T4H1_9ROSIUncharacterized protein. (828 aa)    
Predicted Functional Partners:
V4SK16_9ROSI
Uncharacterized protein.
 
     0.671
V4TAV6_9ROSI
Uncharacterized protein.
      
 0.539
V4VVG9_9ROSI
OB domain-containing protein.
    
 
 0.539
V4VBH5_9ROSI
Uncharacterized protein.
  
     0.472
V4SVG0_9ROSI
Uncharacterized protein.
  
     0.470
V4TLS7_9ROSI
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
      
 0.448
V4SUQ2_9ROSI
Protein kinase domain-containing protein.
  
 
   0.433
V4TP68_9ROSI
Uncharacterized protein.
  
     0.430
V4TNP1_9ROSI
LEA_2 domain-containing protein.
  
     0.416
V4TKR8_9ROSI
SAWADEE domain-containing protein.
  
     0.412
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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