STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4T4J2_9ROSIUncharacterized protein. (546 aa)    
Predicted Functional Partners:
V4SJC4_9ROSI
Uncharacterized protein.
    
 0.696
V4TNY2_9ROSI
ERCC4 domain-containing protein.
   
 0.684
V4TEY0_9ROSI
dUTPase domain-containing protein.
   
 0.623
V4TYV7_9ROSI
dUTPase domain-containing protein.
   
 0.623
V4VWI2_9ROSI
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.623
V4VHS5_9ROSI
ERCC4 domain-containing protein.
   
 0.589
V4SQL0_9ROSI
Uncharacterized protein.
    
 0.547
V4T3B6_9ROSI
ASCH domain-containing protein.
    
 0.478
V4S3Y2_9ROSI
Uncharacterized protein.
    
 0.460
V4RTN9_9ROSI
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.418
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.