STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4T852_9ROSIRibosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (96 aa)    
Predicted Functional Partners:
V4TBM3_9ROSI
Uncharacterized protein.
  
 
 0.958
V4TD26_9ROSI
Uncharacterized protein.
 
 0.957
V4UTM1_9ROSI
Uncharacterized protein.
   
 
 0.954
V4TK23_9ROSI
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
 
 0.953
V4TTC9_9ROSI
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
 0.951
V4UL75_9ROSI
Uncharacterized protein.
   
 
 0.949
V4RUQ3_9ROSI
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 0.948
V4TCI6_9ROSI
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.941
V4VSL4_9ROSI
Trigger_N domain-containing protein.
  
 
 0.938
V4UH05_9ROSI
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
  
 0.934
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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