STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TBU5_9ROSISmr domain-containing protein. (877 aa)    
Predicted Functional Partners:
V4V9W4_9ROSI
AP2/ERF domain-containing protein.
    
 
 0.548
V4S6L6_9ROSI
Uncharacterized protein.
   
  
 0.547
V4SCG9_9ROSI
DUF3479 domain-containing protein.
      
 0.543
V4U2B7_9ROSI
GUN4 domain-containing protein.
      
 0.543
V4UII4_9ROSI
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.478
V4TEK1_9ROSI
Uncharacterized protein.
      
 0.475
V4SXQ0_9ROSI
RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released.
    
 
 0.460
V4U5W4_9ROSI
Uncharacterized protein.
      
 0.455
V4VJZ2_9ROSI
DUF3506 domain-containing protein.
      
 0.455
V4U4I5_9ROSI
RRM domain-containing protein.
      
0.453
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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