Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
V4S6L6_9ROSI | V4TBU5_9ROSI | V4S6L6 | V4TBU5 | Uncharacterized protein. | Smr domain-containing protein. | 0.547 |
V4SCG9_9ROSI | V4TBU5_9ROSI | V4SCG9 | V4TBU5 | DUF3479 domain-containing protein. | Smr domain-containing protein. | 0.543 |
V4SCG9_9ROSI | V4U2B7_9ROSI | V4SCG9 | V4U2B7 | DUF3479 domain-containing protein. | GUN4 domain-containing protein. | 0.688 |
V4SCG9_9ROSI | V4U5W4_9ROSI | V4SCG9 | V4U5W4 | DUF3479 domain-containing protein. | Uncharacterized protein. | 0.472 |
V4SCG9_9ROSI | V4UII4_9ROSI | V4SCG9 | V4UII4 | DUF3479 domain-containing protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.573 |
V4SCG9_9ROSI | V4V9W4_9ROSI | V4SCG9 | V4V9W4 | DUF3479 domain-containing protein. | AP2/ERF domain-containing protein. | 0.463 |
V4SXQ0_9ROSI | V4TBU5_9ROSI | V4SXQ0 | V4TBU5 | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. | Smr domain-containing protein. | 0.460 |
V4TBU5_9ROSI | V4S6L6_9ROSI | V4TBU5 | V4S6L6 | Smr domain-containing protein. | Uncharacterized protein. | 0.547 |
V4TBU5_9ROSI | V4SCG9_9ROSI | V4TBU5 | V4SCG9 | Smr domain-containing protein. | DUF3479 domain-containing protein. | 0.543 |
V4TBU5_9ROSI | V4SXQ0_9ROSI | V4TBU5 | V4SXQ0 | Smr domain-containing protein. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. | 0.460 |
V4TBU5_9ROSI | V4TEK1_9ROSI | V4TBU5 | V4TEK1 | Smr domain-containing protein. | Uncharacterized protein. | 0.475 |
V4TBU5_9ROSI | V4U2B7_9ROSI | V4TBU5 | V4U2B7 | Smr domain-containing protein. | GUN4 domain-containing protein. | 0.543 |
V4TBU5_9ROSI | V4U4I5_9ROSI | V4TBU5 | V4U4I5 | Smr domain-containing protein. | RRM domain-containing protein. | 0.453 |
V4TBU5_9ROSI | V4U5W4_9ROSI | V4TBU5 | V4U5W4 | Smr domain-containing protein. | Uncharacterized protein. | 0.455 |
V4TBU5_9ROSI | V4UII4_9ROSI | V4TBU5 | V4UII4 | Smr domain-containing protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. | 0.478 |
V4TBU5_9ROSI | V4V9W4_9ROSI | V4TBU5 | V4V9W4 | Smr domain-containing protein. | AP2/ERF domain-containing protein. | 0.548 |
V4TBU5_9ROSI | V4VJZ2_9ROSI | V4TBU5 | V4VJZ2 | Smr domain-containing protein. | DUF3506 domain-containing protein. | 0.455 |
V4TEK1_9ROSI | V4TBU5_9ROSI | V4TEK1 | V4TBU5 | Uncharacterized protein. | Smr domain-containing protein. | 0.475 |
V4U2B7_9ROSI | V4SCG9_9ROSI | V4U2B7 | V4SCG9 | GUN4 domain-containing protein. | DUF3479 domain-containing protein. | 0.688 |
V4U2B7_9ROSI | V4TBU5_9ROSI | V4U2B7 | V4TBU5 | GUN4 domain-containing protein. | Smr domain-containing protein. | 0.543 |
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