STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TC10_9ROSIUncharacterized protein. (686 aa)    
Predicted Functional Partners:
V4SZN2_9ROSI
Nop domain-containing protein.
   
 
 0.720
V4TC36_9ROSI
Uncharacterized protein.
   
 
 0.688
V4TH98_9ROSI
G-patch domain-containing protein.
   
 
 0.605
V4VSI7_9ROSI
Sas10 domain-containing protein.
   
  
 0.502
V4SYS7_9ROSI
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
  
 0.501
V4U879_9ROSI
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 0.501
V4SPE6_9ROSI
Nop domain-containing protein.
   
 
 0.495
V4T282_9ROSI
Nop domain-containing protein.
   
 
 0.495
V4SEQ4_9ROSI
Uncharacterized protein.
   
    0.473
V4SHF6_9ROSI
Uncharacterized protein.
   
 
 0.469
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.