STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TDW7_9ROSIPectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family. (510 aa)    
Predicted Functional Partners:
V4U1L8_9ROSI
Uncharacterized protein.
  
  
  0.748
V4TCS5_9ROSI
Pectate lyase.
  
 
  0.745
V4U618_9ROSI
Uncharacterized protein.
  
  
 0.744
V4WBG6_9ROSI
Uncharacterized protein.
  
  
 0.741
V4S4B8_9ROSI
Pectate lyase.
  
 
  0.740
V4STK3_9ROSI
Uncharacterized protein.
  
  
  0.739
V4SNJ3_9ROSI
Uncharacterized protein.
  
  
  0.737
V4TL25_9ROSI
Uncharacterized protein.
  
  
  0.737
V4SPP8_9ROSI
Pectate lyase.
  
 
  0.734
V4TZ16_9ROSI
Pectate lyase.
  
  
  0.732
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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