STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4TL62_9ROSIUncharacterized protein. (2041 aa)    
Predicted Functional Partners:
V4SXS0_9ROSI
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.953
V4T8Q2_9ROSI
Uncharacterized protein.
    
 
 0.950
V4VAJ0_9ROSI
Uncharacterized protein.
    
 
 0.950
V4ST29_9ROSI
Uncharacterized protein.
    
 
 0.855
V4T1V8_9ROSI
CBFD_NFYB_HMF domain-containing protein.
    
 
 0.855
V4TR08_9ROSI
Uncharacterized protein.
    
 
 0.855
V4TLA7_9ROSI
Peptidase_M1 domain-containing protein.
   
  
 0.685
V4SAE9_9ROSI
Sister chromatid cohesion protein.
   
  
 0.630
V4S826_9ROSI
SANT domain-containing protein.
   
  
 0.625
V4U0X9_9ROSI
Uncharacterized protein.
   
 
 0.566
Your Current Organism:
Citrus clementina
NCBI taxonomy Id: 85681
Other names: C. clementina, Citrus deliciosa x Citrus sinensis, clementine
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.